Syllabus
- Week 1 : Introduction to genomics
- Week 2 : Alignment of high-throughput sequence reads with exact string-matching
- Week 3 : Homology, repeats and gene families by similarity searches
- Week 4 : Neutral sequence evolution by Markov models
- Week 5 : Phylogenetics and tree reconstruction
- Week 6 : Speed of evolution (Markov models)
- Week 7 : Coalescent models (MCMC)
- Week 8 : Ancestral recombination graphs
- Week 9 : Midterm
- Week 9 : Projects
- Week 10 : Genetic mapping (hypothesis testing)
- Week 11 : Negative, Selection
- Week 14 : Projects final presentation
