Software

  • MutaGeneSys
    A tool that integrates OMIM and HapMap-based single- and multi-marker predictors of causal SNPs to report the collection of associated alleles in a whole-genome-typed individual.

  • Xplorigin
    A tool for parsing population ancestry of admixed individuals.

  • Germline
    A tool for detecting IBD segments in "unrelated individuals".

  • Dash
    A tool for detecting association to clusters of IBD segments detected by Germline.

  • HLA-IBD
    A tool for imputing HLA based on GERMLINE output

  • INFOSTIP
    A tool for selecting INdividual FOr Sequencing by Total Information Potantial, based on GERMLINE output

  • ShareViz
    A tool for graph visualization of hidden relatedness based on GERMLINE output

  • HaDiT
    A tool for computing and visualizing allelic distortion in tumor SNP data

  • PoolDesign
    A tool for designing overlappign pools for variant-carrier identification

  • OPERA
    A tool for power estimation and design of whole-genome resequencing projects aimed at rare variant associations.

  • Zinfandel
    A tool for detecting CNVs from low-pass WGS data.