Publications

Journal Publications

SQUiD: ultra-secure storage and analysis of genetic data for the advancement of precision medicine

Jacob Blindenbach, Jiayi Kang, Seungwan Hong, Caline Karam, Thomas Lehner, and Gamze Gürsoy
Genome Biology 2024 [Article] [PMC] [Code]

Avoiding Genetic Racial Profiling in Criminal DNA Profile Databases

Jacob Blindenbach, Karthik Jagadeesh, Gill Bejerano, and David Wu
Nature Computational Science 2021 [PDF] [Code]

Conference Publications

On the overflow and p-adic theory applied to homomorphic encryption

Jacob Blindenbach, Jung Hee Cheon, Gamze Gürsoy, and Jiayi Kang
CSCML 2024 [Chapter] [ePrint] [Code]

Preprints

Privacy-Preserving Pangenome Graphs

Jacob Blindenbach, Shaunak Soni, and Gamze Gürsoy
bioRxiv 2026 [Preprint] [Code]