Class SimulateExonMeasurements

java.lang.Object
  SimulateExonMeasurements

public class SimulateExonMeasurements
extends java.lang.Object

Field Summary

(package private) static java.util.ArrayList<java.lang.String>	baselineExonFileNames
(package private) static java.util.ArrayList<java.lang.Integer>	chromosomes
(package private) static java.util.ArrayList<Exon>	exons

Constructor Summary

SimulateExonMeasurements()

Method Summary

private static double	getLikelyValue(double mean, double stddev)
static void	main(java.lang.String[] args)
private static void	parseArguments(java.lang.String[] arguments)
private static int	SimulateRegion(java.util.ArrayList<Exon> ExpectedValues, java.util.ArrayList<Exon> StdDeviations, java.lang.String stateName, int index)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

baselineExonFileNames

static java.util.ArrayList<java.lang.String> baselineExonFileNames

chromosomes

static java.util.ArrayList<java.lang.Integer> chromosomes

exons

static java.util.ArrayList<Exon> exons

Constructor Detail

SimulateExonMeasurements

public SimulateExonMeasurements()

Method Detail

main

public static void main(java.lang.String[] args)

SimulateRegion

private static int SimulateRegion(java.util.ArrayList<Exon> ExpectedValues,
                                  java.util.ArrayList<Exon> StdDeviations,
                                  java.lang.String stateName,
                                  int index)

getLikelyValue

private static double getLikelyValue(double mean,
                                     double stddev)

parseArguments

private static void parseArguments(java.lang.String[] arguments)