Research Interests

Population genetics
Statistical genetics
Artificial Intelligence

Pier Francesco Palamara


Short Bio

I am currently an associate professor at the Department of Statistics at the University of Oxford, where I work on statistical and population genetics. This page is not being updated. See here for my current web page.

Between 2014 and 2017 I have been at the Harvard School of Public Health and the Broad Institute of MIT and Harvard, working on statistical genetics problems as a postdoctoral researcher in Alkes Price's group.

I defended my Ph.D. thesis at Columbia University in October 2013. My advisor was Itsik Pe'er, and I mainly worked on computational models for population genetics. During my graduate studies, I briefly worked at Microsoft Research (LA) and IBM Research (T.J. Watson, NY).

I obtained my "laurea di Primo Livello" and "Laurea Specialistica" (B.S. and M.S. degrees) from Rome's Sapienza University, and a M.S. degree from Columbia University (Dec. 2009). During this time, the focus of my studies/research was on artificial intelligence, cognitive robotics and machine learning.

Publications

See my list of publications, or Google Scholar profile.

Software

Some of the code I wrote for my projects is available at my Github page
  • ARGON - a fast genome simulator sampling from the discrete time Wright-Fisher model (see this paper). The simulator can efficiently output IBD segments.

  • IBDMUT - inferring mutation and gene conversion rates using IBD (see this paper).

  • DoRIS - a tool for demographic inference based on shared IBD haplotypes (see this paper).

Contact

    current: p...@stats.ox.ac.uk
    ppal.........@hsph.harvard.edu
    pie.........@cs.columbia.edu



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